Package: specr 1.0.1
Philipp K. Masur
specr: Conducting and Visualizing Specification Curve Analyses
Provides utilities for conducting specification curve analyses (Simonsohn, Simmons & Nelson (2020, <doi:10.1038/s41562-020-0912-z>) or multiverse analyses (Steegen, Tuerlinckx, Gelman & Vanpaemel, 2016, <doi:10.1177/1745691616658637>) including functions to setup, run, evaluate, and plot all specifications.
Authors:
specr_1.0.1.tar.gz
specr_1.0.1.zip(r-4.5)specr_1.0.1.zip(r-4.4)specr_1.0.1.zip(r-4.3)
specr_1.0.1.tgz(r-4.4-any)specr_1.0.1.tgz(r-4.3-any)
specr_1.0.1.tar.gz(r-4.5-noble)specr_1.0.1.tar.gz(r-4.4-noble)
specr_1.0.1.tgz(r-4.4-emscripten)specr_1.0.1.tgz(r-4.3-emscripten)
specr.pdf |specr.html✨
specr/json (API)
NEWS
| # Install 'specr' in R: |
| install.packages('specr', repos = c('https://masurp.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/masurp/specr/issues
- example_data - Example data set
Last updated 6 months agofrom:92e9f659ce. Checks:OK: 1 ERROR: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 25 2024 |
| R-4.5-win | ERROR | Oct 25 2024 |
| R-4.5-linux | ERROR | Oct 25 2024 |
| R-4.4-win | ERROR | Oct 25 2024 |
| R-4.4-mac | ERROR | Oct 25 2024 |
| R-4.3-win | ERROR | Oct 25 2024 |
| R-4.3-mac | ERROR | Oct 25 2024 |
Exports:%>%as_tibbleboot_nullicc_specsplot_choicesplot_curveplot_decisiontreeplot_gridplot_samplesizesplot_specsplot_summaryplot_variancerun_specssetupsetup_specsspecrsummarise_specs
Dependencies:backportsbootbroomcachemclicodetoolscolorspacecowplotcpp11digestdplyrfansifarverfastmapfurrrfuturegenericsggforceggplot2ggraphggrepelglobalsgluegraphlayoutsgridExtragtableigraphisobandlabelinglatticelifecyclelistenvlme4magrittrMASSMatrixmemoisemgcvminqamunsellnlmenloptrparallellypillarpkgconfigpolyclippurrrR6RColorBrewerRcppRcppArmadilloRcppEigenrlangrsamplescalessliderstringistringrsystemfontstibbletidygraphtidyrtidyselecttweenrutf8vctrsviridisviridisLitewarpwithr
An introduction to specr
Rendered fromgetting-started.rmdusingknitr::rmarkdownon Oct 25 2024.Last update: 2023-01-20
Started: 2023-01-17
Incorporating Bayesian Statistics
Rendered fromparallel-bayesian-models.Rmdusingknitr::rmarkdownon Oct 25 2024.Last update: 2024-05-28
Started: 2023-01-17
Incorporating multilevel models
Rendered frommultilevel-models.Rmdusingknitr::rmarkdownon Oct 25 2024.Last update: 2023-01-20
Started: 2023-01-17
Incorporating structural equation models
Rendered frommeasurement-models.Rmdusingknitr::rmarkdownon Oct 25 2024.Last update: 2023-01-20
Started: 2023-01-17
Inference with specification curve analysis
Rendered frominferences.Rmdusingknitr::rmarkdownon Oct 25 2024.Last update: 2024-05-23
Started: 2024-05-22
Investigating specific specifications
Rendered frominvest-spec.Rmdusingknitr::rmarkdownon Oct 25 2024.Last update: 2023-01-20
Started: 2023-01-16
Setting up different types of specifications
Rendered fromdifferent-specifications.Rmdusingknitr::rmarkdownon Oct 25 2024.Last update: 2023-01-20
Started: 2023-01-16
Using parallelization
Rendered fromparallelization.Rmdusingknitr::rmarkdownon Oct 25 2024.Last update: 2024-01-26
Started: 2023-01-16
Visualizing specification curve analyses
Rendered fromcustom-plot.rmdusingknitr::rmarkdownon Oct 25 2024.Last update: 2023-01-20
Started: 2019-12-13
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Example data set | example_data |
| Compute intraclass correlation coefficient | icc_specs |
| Plot how analytical choices affect results | plot_choices |
| Plot ranked specification curve | plot_curve |
| Plot decision tree | plot_decisiontree |
| Plot sample sizes | plot_samplesizes |
| Plot specification curve and analytical choices | plot_specs |
| Create box plots for given analytical choices | plot_summary |
| Plot variance decomposition | plot_variance |
| Plot specification curve and under-the-null distributions | plot.specr.boot |
| Plot specification curve and analytic choices | plot.specr.object |
| Plot visualization of the specification setup | plot.specr.setup |
| Estimate all specifications | run_specs |
| Specifying analytical decisions in a specification setup | setup |
| Fit models across all specifications | specr |
| Summarise specifications | summarise_specs |
| Summarizing the bootstrapped results | summary.specr.boot |
| Summarizing the Specification Curve Analysis | summary.specr.object |
| Summarizing the Specifications Setup | summary.specr.setup |